Publications

Anna MARABOTTI Publications


2025
Articolo in rivista
Improvement of Mutant Galactose-1-Phosphate Uridylyltransferase (GALT) Activity by FDA-Approved Pharmacochaperones: A Preliminary Study
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES. Vol. 26. Pag.26030888-26030888
ISSN:1422-0067.
Scafuri, Bernardina; Piscosquito, Stefania; Giliberti, Giulia; Facchiano, Angelo; Miner, Jaden; Balakrishnan, Bijina; Lai, Kent; Marabotti, Anna
Digital Object Identifier (DOI): 10.3390/ijms26030888
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2024
Articolo in rivista
Emerging role of carbonyl-carbonyl interactions in the classification of beta turns
PROTEIN SCIENCE. Pag.e4868-e4868
ISSN:0961-8368.
D'Arminio, Nancy; Ruggiero, Valentina; Pierri, Giovanni; Marabotti, Anna; Tedesco, Consiglia
Digital Object Identifier (DOI): 10.1002/pro.4868
Codice identificativo ISI: WOS:001147637500001
Codice identificativo SCOPUS: 2-s2.0-85182820152
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2024
Articolo in rivista
Bioinformatics Study on Site-Specific Variations of Eotaxin-3, a Key Chemokine in Eosinophilic Esophagitis (EoE)
GENES. Vol. 15. Pag.1-14
ISSN:2073-4425.
Giordano, Deborah; D'Acierno, Antonio; Marabotti, Anna; Iovino, Paola; Iacomino, Giuseppe; Facchiano, Angelo
Digital Object Identifier (DOI): 10.3390/genes15081073
Codice identificativo ISI: WOS:001304862000001
Codice identificativo SCOPUS: 2-s2.0-85202454755
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2024
Articolo in rivista
Theoretical study based on molecular docking to investigate the potential interaction of known antiviral food components with SARS-CoV-2 proteins
FOOD BIOSCIENCE. Vol. 62. Pag.105415-105415
ISSN:2212-4292.
Giordano, Deborah; Argenio, Maria Antonia; Scafuri, Bernardina; Carbone, Virginia; Bonora, Simone; D'Arminio, Nancy; Marabotti, Anna; Facchiano, Angelo
Digital Object Identifier (DOI): 10.1016/j.fbio.2024.105415
Codice identificativo ISI: WOS:001359435800001
Codice identificativo SCOPUS: 2-s2.0-85208963061
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2023
Articolo in rivista
HINT, a code for understanding the interaction between biomolecules: a tribute to Donald J. Abraham
FRONTIERS IN MOLECULAR BIOSCIENCES. Vol. 10. Pag.1194962-1194962
ISSN:2296-889X.
Kellogg, Glen E; Marabotti, Anna; Spyrakis, Francesca; Mozzarelli, Andrea
Digital Object Identifier (DOI): 10.3389/fmolb.2023.1194962
Codice identificativo ISI: WOS:001016694200001
Codice identificativo SCOPUS: 2-s2.0-85163049700
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2023
Articolo in rivista
Resources and tools for rare disease variant interpretation
FRONTIERS IN MOLECULAR BIOSCIENCES. Vol. 10. Pag.1169109-1169109
ISSN:2296-889X.
Licata, Luana; Via, Allegra; Turina, Paola; Babbi, Giulia; Benevenuta, Silvia; Carta, Claudio; Casadio, Rita; Cicconardi, Andrea; Facchiano, Angelo; Fariselli, Piero; Giordano, Deborah; Isidori, Federica; Marabotti, Anna; Martelli, Pier Luigi; Pascarella, Stefano; Pinelli, Michele; Pippucci, Tommaso; Russo, Roberta; Savojardo, Castrense; Scafuri, Bernardina; Valeriani, Lucrezia; Capriotti, Emidio
Digital Object Identifier (DOI): 10.3389/fmolb.2023.1169109
Codice identificativo ISI: WOS:001000438900001
Codice identificativo SCOPUS: 2-s2.0-85160058924
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2023
Articolo in rivista
Standardizing macromolecular structure files: further efforts are needed
TRENDS IN BIOCHEMICAL SCIENCES. Vol. 48. Pag.590-596
ISSN:0968-0004.
D'Arminio, Nancy; Giordano, Deborah; Scafuri, Bernardina; Facchiano, Angelo; Marabotti, Anna
Digital Object Identifier (DOI): 10.1016/j.tibs.2023.03.002
Codice identificativo ISI: WOS:001021130400001
Codice identificativo SCOPUS: 2-s2.0-85152668053
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2023
Articolo in rivista
An overview of bioinformatics courses delivered at the academic level in Italy: Reflections and recommendations from BITS
PLOS COMPUTATIONAL BIOLOGY. Vol. 19. Pag.1010846-1010846
ISSN:1553-7358.
Marangoni, Roberto; Bevilacqua, Vitoantonio; Cannataro, Mario; Mele, Bruno Hay; Mauri, Giancarlo; Marabotti, Anna
Digital Object Identifier (DOI): 10.1371/journal.pcbi.1010846
Codice identificativo ISI: WOS:000966034000001
Codice identificativo SCOPUS: 2-s2.0-85147921466
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2023
Articolo in rivista
An automated pipeline integrating AlphaFold 2 and MODELLER for protein structure prediction
COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL. Vol. 21. Pag.5620-5629
ISSN:2001-0370.
Gil Zuluaga, Fabio Hernan; D'Arminio, Nancy; Bardozzo, Francesco; Tagliaferri, Roberto; Marabotti, Anna
Digital Object Identifier (DOI): 10.1016/j.csbj.2023.10.056
Codice identificativo ISI: WOS:001119325000001
Codice identificativo SCOPUS: 2-s2.0-85177800324
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2022
Articolo in rivista
Investigating the Effects of Amino Acid Variations in Human Menin
MOLECULES. Vol. 27. Pag.1747-1747
ISSN:1420-3049.
Biancaniello, Carmen; D’Argenio, Antonia; Giordano, Deborah; Dotolo, Serena; Scafuri, Bernardina; Marabotti, Anna; D’Acierno, Antonio; Tagliaferri, Roberto; Facchiano, Angelo
Digital Object Identifier (DOI): 10.3390/molecules27051747
Codice identificativo ISI: WOS:000767981000001
Codice identificativo SCOPUS: 2-s2.0-85126296937
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2022
Articolo in rivista
Computational methods to assist in the discovery of pharmacological chaperones for rare diseases
BRIEFINGS IN BIOINFORMATICS. Vol. 23. Pag.1-11
ISSN:1467-5463.
Scafuri, Bernardina; Verdino, Anna; D'Arminio, Nancy; Marabotti, Anna
Digital Object Identifier (DOI): 10.1093/bib/bbac198
Codice identificativo ISI: WOS:000798063700001
Codice identificativo SCOPUS: 2-s2.0-85139267859
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2022
Articolo in rivista
Molecular dynamics analysis of the structural properties of the transglutaminases of Kutzneria albida and Streptomyces mobaraensis
COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL. Vol. 20. Pag.3924-3934
ISSN:2001-0370.
Giordano, Deborah; Langini, Cassiano; Caflisch, Amedeo; Marabotti, Anna; Facchiano, Angelo
Digital Object Identifier (DOI): 10.1016/j.csbj.2022.07.024
Codice identificativo ISI: WOS:000889723800003
Codice identificativo SCOPUS: 2-s2.0-85134879049
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2022
Articolo in rivista
Trophic hierarchy in a marine community revealed by network analysis on co-occurrence data
FOOD WEBS. Vol. 32. Pag.246-246
ISSN:2352-2496.
Russo, L; Casella, V; Marabotti, A; Jordan, F; Congestri, R; D' Alelio, D
Digital Object Identifier (DOI): 10.1016/j.fooweb.2022.e00246
Codice identificativo ISI: WOS:000837287600001
Codice identificativo SCOPUS: 2-s2.0-85146322366
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2022
Articolo in rivista
In Silico Analysis of the Effects of Omicron Spike Amino Acid Changes on the Interactions with Human Proteins
MOLECULES. Vol. 27. Pag.4827-4827
ISSN:1420-3049.
D'Arminio, Nancy; Giordano, Deborah; Scafuri, Bernardina; Biancaniello, Carmen; Petrillo, Mauro; Facchiano, Angelo; Marabotti, Anna
Digital Object Identifier (DOI): 10.3390/molecules27154827
Codice identificativo ISI: WOS:000839804900001
Codice identificativo SCOPUS: 2-s2.0-85137028830
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2021
Articolo in rivista
Predicting the stability of mutant proteins by computational approaches: an overview
BRIEFINGS IN BIOINFORMATICS. Pag.1-1
ISSN:1467-5463.
Marabotti, Anna; Scafuri, Bernardina; Facchiano, Angelo
Digital Object Identifier (DOI): 10.1093/bib/bbaa074
Codice identificativo ISI: WOS:000709461300026
Codice identificativo SCOPUS: 2-s2.0-85107088729
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2021
Articolo in rivista
A review on drug repurposing applicable to COVID-19
BRIEFINGS IN BIOINFORMATICS. Vol. 22. Pag.726-741
ISSN:1467-5463.
Dotolo, Serena; Marabotti, Anna; Facchiano, Angelo; Tagliaferri, Roberto
Digital Object Identifier (DOI): 10.1093/bib/bbaa288
Codice identificativo ISI: WOS:000642298000010
Codice identificativo SCOPUS: 2-s2.0-85103474382
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2021
Articolo in rivista
The odd couple(S): An overview of beta-lactam antibiotics bearing more than one pharmacophoric group
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES. Vol. 22. Pag.1-21
ISSN:1661-6596.
De Rosa, M.; Verdino, A.; Soriente, A.; Marabotti, A.
Digital Object Identifier (DOI): 10.3390/ijms22020617
Codice identificativo ISI: WOS:000611298400001
Codice identificativo SCOPUS: 2-s2.0-85099291237
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2021
Articolo in rivista
Analysis of the Structure-Function-Dynamics Relationships of GALT Enzyme and of Its Pathogenic Mutant p.Q188R: A Molecular Dynamics Simulation Study in Different Experimental Conditions
MOLECULES. Vol. 26. Pag.5941-5941
ISSN:1420-3049.
Verdino, Anna; D’Urso, Gaetano; Tammone, Carmen; Scafuri, Bernardina; Marabotti, Anna
Digital Object Identifier (DOI): 10.3390/molecules26195941
Codice identificativo ISI: WOS:000709486900001
Codice identificativo SCOPUS: 2-s2.0-85116560544
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2021
Articolo in rivista
A multiple network-based bioinformatics pipeline for the study of molecular mechanisms in oncological diseases for personalized medicine
BRIEFINGS IN BIOINFORMATICS. Pag.1-13
ISSN:1467-5463.
Dotolo, Serena; Marabotti, Anna; Rachiglio, Anna Maria; Esposito Abate, Riziero; Benedetto, Marco; Ciardiello, Fortunato; De Luca, Antonella; Normanno, Nicola; Facchiano, Angelo; Tagliaferri, Roberto
Digital Object Identifier (DOI): 10.1093/bib/bbab180
Codice identificativo ISI: WOS:000733325700051
Codice identificativo SCOPUS: 2-s2.0-85121949448
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2021
Articolo in rivista
Performance of Web tools for predicting changes in protein stability caused by mutations
BMC BIOINFORMATICS. Vol. 22. Pag.345-345
ISSN:1471-2105.
Marabotti, Anna; Del Prete, Eugenio; Scafuri, Bernardina; Facchiano, Angelo
Digital Object Identifier (DOI): 10.1186/s12859-021-04238-w
Codice identificativo ISI: WOS:000669880600001
Codice identificativo SCOPUS: 2-s2.0-85109310066
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2021
Articolo in rivista
Editorial: Computational Proteomics and Integration of Data Resources for Advanced Studies in Life Sciences
FRONTIERS IN GENETICS. Vol. 12. Pag.729013-729013
ISSN:1664-8021.
Marabotti, Anna; Romano, Paolo; Facchiano, Angelo
Digital Object Identifier (DOI): 10.3389/fgene.2021.729013
Codice identificativo ISI: WOS:000681572800001
Codice identificativo SCOPUS: 2-s2.0-85112608226
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2021
Articolo in rivista
Bifunctional Beta-Lactam Antibiotics
ENCYCLOPEDIA. Pag.1-1
ISSN:2673-8392.
Marabotti, A.
Versione online
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2021
Articolo in rivista
Simulation of the Interactions of Arginine with Wild-Type GALT Enzyme and the Classic Galactosemia-Related Mutant p.Q188R by a Computational Approach
MOLECULES. Vol. 26. Pag.6061-6061
ISSN:1420-3049.
Verdino, Anna; D'Urso, Gaetano; Tammone, Carmen; Scafuri, Bernardina; Catapano, Lucrezia; Marabotti, Anna
Digital Object Identifier (DOI): 10.3390/molecules26196061
Codice identificativo ISI: WOS:000709619300001
Codice identificativo SCOPUS: 2-s2.0-85117011870
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2020
Articolo in rivista
Assessment of haptoglobin alleles in autism spectrum disorders
SCIENTIFIC REPORTS. Vol. 10. Pag.7758-7758
ISSN:2045-2322.
Cupaioli, F. A.; Mosca, E.; Magri, C.; Gennarelli, M.; Moscatelli, M.; Raggi, M. E.; Landini, M.; Galluccio, N.; Villa, L.; Bonfanti, A.; Renieri, A.; Fallerini, C.; Minelli, A.; Marabotti, A.; Milanesi, L.; Fasano, A.; Mezzelani, A.
Digital Object Identifier (DOI): 10.1038/s41598-020-64679-w
Codice identificativo ISI: WOS:000560352200011
Codice identificativo SCOPUS: 2-s2.0-85084315184
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2020
Articolo in rivista
New compounds for a good old class: Synthesis of two Β-lactam bearing cephalosporins and their evaluation with a multidisciplinary approach
BIOORGANIC & MEDICINAL CHEMISTRY. Vol. 28. Pag.115302-115302
ISSN:0968-0896.
Vigliotta, G.; Giordano, D.; Verdino, A.; Caputo, I.; Martucciello, S.; Soriente, A.; Marabotti, A.; De Rosa, M.
Digital Object Identifier (DOI): 10.1016/j.bmc.2019.115302
Codice identificativo ISI: WOS:000509463700010
Codice identificativo SCOPUS: 2-s2.0-85077712907
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2019
Articolo in rivista
Searching for Chymase Inhibitors among Chamomile Compounds Using a Computational-Based Approach
BIOMOLECULES. Vol. 9. Pag.5-5
ISSN:2218-273X.
Dubey, Amit; Dotolo, Serena; Ramteke, Pramod W.; Facchiano, Angelo; Marabotti, Anna
Digital Object Identifier (DOI): 10.3390/biom9010005
Codice identificativo ISI: WOS:000458051700005
Codice identificativo SCOPUS: 2-s2.0-85058918932
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2018
Articolo in rivista
The evolution of a Web resource: The Galactosemia Proteins Database 2.0
HUMAN MUTATION. Vol. 39. Pag.52-60
ISSN:1059-7794.
D'Acierno, Antonio; Scafuri, Bernardina; Facchiano, Angelo; Marabotti, Anna
Versione online
Digital Object Identifier (DOI): 10.1002/humu.23346
Codice identificativo ISI: WOS:000417572000004
Codice identificativo SCOPUS: 2-s2.0-85037671116
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2018
Articolo in rivista
Galactose-1-Phosphate Uridyltransferase deficiency: a literature review of the putative mechanisms of short and long-term complications and allelic variants
CLINICAL GENETICS. Vol. 93. Pag.206-215
ISSN:0009-9163.
Viggiano, Emanuela; Marabotti, Anna; Politano, Luisa; Burlina, Alberto
Digital Object Identifier (DOI): 10.1111/cge.13030
Codice identificativo ISI: WOS:000423373900002
Codice identificativo SCOPUS: 2-s2.0-85041081250
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2018
Articolo in rivista
Computational analysis of the interactions of a novel cephalosporin derivative with β-lactamases
BMC STRUCTURAL BIOLOGY. Pag.13-13
ISSN:1472-6807.
Verdino, Anna; Zollo, F; De Rosa, M; Soriente, A; Hernandez-Martinez, Ma; Marabotti, A
Digital Object Identifier (DOI): 10.1186/s12900-018-0092-5
Codice identificativo ISI: WOS:000460041900001
Codice identificativo SCOPUS: 2-s2.0-85054467368
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2017
Articolo in rivista
Binding of mycotoxins to proteins involved in neuronal plasticity: a combined in silico/wet investigation
SCIENTIFIC REPORTS. Vol. 7. Pag.15156-15156
ISSN:2045-2322.
Scafuri, Bernardina; Varriale, Antonio; Facchiano, Angelo; D'Auria, Sabato; Raggi, Maria Elisabetta; Marabotti, Anna
Digital Object Identifier (DOI): 10.1038/s41598-017-15148-4
Codice identificativo ISI: WOS:000414810600039
Codice identificativo SCOPUS: 2-s2.0-85033708337
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2017
Articolo in rivista
Study on the association among mycotoxins and other variables in children with autism
TOXINS. Vol. 9. Pag.e203-e203
ISSN:2072-6651.
De Santis, Barbara; Raggi, Maria Elisabetta; Moretti, Giorgio; Facchiano, Francesco; Mezzelani, Alessandra; Villa, Laura; Bonfanti, Arianna; Campioni, Alessandra; Rossi, Stefania; Camposeo, Serena; Soricelli, Sabina; Moracci, Gabriele; Debegnach, Francesca; Gregori, Emanuela; Ciceri, Francesca; Milanesi, Luciano; Marabotti, Anna; Brera, Carlo
Versione online
Digital Object Identifier (DOI): 10.3390/toxins9070203
Codice identificativo ISI: WOS:000407323700001
Codice identificativo SCOPUS: 2-s2.0-85021660985
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2017
Articolo in rivista
Synthesis and biological evaluation of the progenitor of a new class of cephalosporin analogues, with a particular focus on structure-based computational analysis
PLOS ONE. Vol. 12. Pag.e0181563-e0181580
ISSN:1932-6203.
Verdino, Anna; Vigliotta, Giovanni; Giordano, Deborah; Caputo, Ivana; Soriente, Annunziata; DE ROSA, Margherita; Marabotti, Anna
Versione online
Digital Object Identifier (DOI): 10.1371/journal.pone.0181563
Codice identificativo ISI: WOS:000406575700058
Codice identificativo SCOPUS: 2-s2.0-85026535453
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2016
Articolo in rivista
Ochratoxin A as possible factor trigging autism and its male prevalence via epigenetic mechanism
NUTRITIONAL NEUROSCIENCE. Vol. 19. Pag.43-46
ISSN:1028-415X.
Mezzelani, A; Raggi, M. E; Marabotti, Anna; Milanesi, L.
Digital Object Identifier (DOI): 10.1179/1476830515Z.000000000186
Codice identificativo ISI: WOS:000368260800005
Codice identificativo SCOPUS: 2-s2.0-84962040428
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2016
Articolo in rivista
Interaction of human chymase with ginkgolides, terpene trilactones of Ginkgo biloba investigated by molecular docking simulations
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS. Vol. 473. Pag.449-454
ISSN:0006-291X.
Dubey, Amit; Marabotti, Anna; Ramteke, Pramod W.; Facchiano, Angelo
Versione online
Digital Object Identifier (DOI): 10.1016/j.bbrc.2016.03.028
Codice identificativo ISI: WOS:000374809700014
Codice identificativo SCOPUS: 2-s2.0-84961233803
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2016
Articolo in rivista
A theoretical study on predicted protein targets of apple polyphenols and possible mechanisms of chemoprevention in colorectal cancer
SCIENTIFIC REPORTS. Vol. 6. Pag.32516-32516
ISSN:2045-2322.
Scafuri, Bernardina; Marabotti, Anna; Carbone, Virginia; Minasi, Paola; Dotolo, Serena; Facchiano, Angelo
Versione online
Digital Object Identifier (DOI): 10.1038/srep32516
Codice identificativo ISI: WOS:000382393600001
Codice identificativo SCOPUS: 2-s2.0-84985911661
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2016
Articolo in rivista
Histological changes, apoptosis and metallothionein levels in Triturus carnifex (Amphibia, Urodela) exposed to environmental cadmium concentrations
AQUATIC TOXICOLOGY. Vol. 173. Pag.63-73
ISSN:0166-445X.
Capaldo, Anna; Gay, Flaminia; Scudiero, Rosaria; Trinchella, Francesca; Caputo, Ivana; Lepretti, Marilena; Marabotti, Anna; Esposito, Carla; Laforgia, Vincenza
Versione online
Digital Object Identifier (DOI): 10.1016/j.aquatox.2016.01.009
Codice identificativo ISI: WOS:000372689900008
Codice identificativo SCOPUS: 2-s2.0-84956668602
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2016
Articolo in rivista
Association Analysis of Noncoding Variants in Neuroligins 3 and 4X Genes with Autism Spectrum Disorder in an Italian Cohort
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES. Vol. 17. Pag.1765-1765
ISSN:1422-0067.
Landini, Martina; Merelli, Ivan; Raggi, M. Elisabetta; Galluccio, Nadia; Ciceri, Francesca; Bonfanti, Arianna; Camposeo, Serena; Massagli, Angelo; Villa, Laura; Salvi, Erika; Cusi, Daniele; Molteni, Massimo; Milanesi, Luciano; Marabotti, Anna; Mezzelani, Alessandra
Digital Object Identifier (DOI): 10.3390/ijms17101765
Codice identificativo ISI: WOS:000387768300014
Codice identificativo SCOPUS: 2-s2.0-84992519531
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2016
Articolo in rivista
In silico approach to find chymase inhibitors among biogenic compounds
FUTURE MEDICINAL CHEMISTRY. Vol. 8. Pag.841-851
ISSN:1756-8919.
Dubey, Amit; Facchiano, Angelo; Ramteke, Pramod W; Marabotti, Anna
Versione online
Digital Object Identifier (DOI): 10.4155/fmc-2016-0030
Codice identificativo ISI: WOS:000377986400002
Codice identificativo SCOPUS: 2-s2.0-84971482895
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2015
Articolo in rivista
Clinical and molecular spectra in galactosemic patients from neonatal screening in northeastern Italy: structural and functional characterization of new variations in the galactose-1-phosphate uridyltransferase (GALT) gene
GENE. Vol. 559. Pag.112-118
ISSN:0378-1119.
Viggiano, E; Marabotti, Anna; Burlina, A. P; Cazzorla, C; D'Apice, M. R; Giordano, L; Fasan, I; Novelli, G; Facchiano, Angelo; Burlina, A. B.
Digital Object Identifier (DOI): 10.1016/j.gene.2015.01.013
Codice identificativo ISI: WOS:000350784300002
Codice identificativo SCOPUS: 2-s2.0-84922448810
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2015
Articolo in rivista
4-Nonylphenol reduces cell viability and induces apoptosis and ER-stress in a human epithelial intestinal cell line
TOXICOLOGY IN VITRO. Vol. 29. Pag.1436-1444
ISSN:0887-2333.
Lepretti, Marilena; Paolella, Gaetana; Giordano, D; Marabotti, Anna; Gay, Flaminia; Capaldo, A; Esposito, Carla; Caputo, Ivana
Versione online
Digital Object Identifier (DOI): 10.1016/j.tiv.2015.04.022
Codice identificativo ISI: WOS:000361263500016
Codice identificativo SCOPUS: 2-s2.0-84936802811
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2015
Articolo in rivista
Environment, dysbiosis, immunity and sex-specific susceptibility: a translational hypothesis for regressive autism pathogenesis
NUTRITIONAL NEUROSCIENCE. Vol. 18. Pag.145-161
ISSN:1028-415X.
Mezzelani, Alessandra; Landini, Martina; Facchiano, Francesco; Raggi, Maria Elisabetta; Villa, Laura; Molteni, Massimo; De Santis, Barbara; Brera, Carlo; Caroli, Anna Maria; Milanesi, Luciano; Marabotti, Anna
Digital Object Identifier (DOI): 10.1179/1476830513Y.0000000108
Codice identificativo ISI: WOS:000352889200001
Codice identificativo SCOPUS: 2-s2.0-84927734238
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2015
Articolo in rivista
Efficient Fludarabine-Activating PNP From Archaea as a Guidance for Redesign the Active Site of E. Coli PNP
JOURNAL OF CELLULAR BIOCHEMISTRY. Vol. 117. Pag.1126-1135
ISSN:0730-2312.
Cacciapuoti, Giovanna; Bagarolo, Maria Libera; Martino, Elisa; Scafuri, Bernardina; Marabotti, Anna; Porcelli, Marina
Digital Object Identifier (DOI): 10.1002/jcb.25396
Codice identificativo ISI: WOS:000372278000008
Codice identificativo SCOPUS: 2-s2.0-84960146107
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2015
Articolo in rivista
Preface: BITS2014, the annual meeting of the Italian Society of Bioinformatics
BMC BIOINFORMATICS. Vol. 16 Suppl 9. Pag.S1-S1
ISSN:1471-2105.
Facchiano, Angelo; Angelini, Claudia; Bosotti, Roberta; Guffanti, Alessandro; Marabotti, Anna; Marangoni, Roberto; Pascarella, Stefano; Romano, Paolo; Zanzoni, Andreas; Helmer Citterich, Manuela
Digital Object Identifier (DOI): 10.1186/1471-2105-16-S9-S1
Codice identificativo ISI: WOS:000367875300001
Codice identificativo SCOPUS: 2-s2.0-84943166246
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2014
Articolo in rivista
GALT Protein Database: querying structural and functional features of GALT enzyme
HUMAN MUTATION. Vol. 35. Pag.1060-1067
ISSN:1098-1004.
D'Acierno, Antonio; Facchiano, Angelo; Marabotti, Anna
Digital Object Identifier (DOI): 10.1002/humu.22613
Codice identificativo ISI: WOS:000340557900004
Codice identificativo SCOPUS: 2-s2.0-84906056147
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2014
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Correlation between fluorescence and structure in the orange-emitting GFP-like protein, monomeric Kusabira Orange
JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY. Vol. 138C. Pag.223-229
ISSN:1011-1344.
A., Ausili; M., Staiano; Marabotti, Anna; G., D'Auria; J. C., Gómez Fernández; A., Torrecillas; A., Ortiz; S., D'Auria
Digital Object Identifier (DOI): 10.1016/j.jphotobiol.2014.04.028
Codice identificativo ISI: WOS:000340987500026
Codice identificativo SCOPUS: 2-s2.0-84903627567
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2014
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GALK inhibitors for classic galactosemia
FUTURE MEDICINAL CHEMISTRY. Vol. 6. Pag.1003-1015
ISSN:1756-8919.
Lai, K; Boxer, Mb; Marabotti, Anna
Digital Object Identifier (DOI): 10.4155/fmc.14.43
Codice identificativo ISI: WOS:000346693700011
Codice identificativo SCOPUS: 2-s2.0-84905179451
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2013
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Celiac anti-type 2 transglutaminase antibodies induce phosphoproteome modification in intestinal epithelial Caco-2 cells
PLOS ONE. Vol. 8. Pag.e84403-e84403
ISSN:1932-6203.
Paolella, Gaetana; Caputo, Ivana; Marabotti, Anna; Lepretti, Marilena; Salzano, Am; Scaloni, A; Vitale, Monica; Zambrano, N; Sblattero, D; Esposito, Carla
Digital Object Identifier (DOI): 10.1371/journal.pone.0084403
Codice identificativo ISI: WOS:000329323900095
Codice identificativo SCOPUS: 2-s2.0-84896738994
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2013
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Correlation Spectroscopy and Molecular Dynamics Simulations to Study the Structural Features of Proteins
PLOS ONE. Vol. 8. Pag.e64840-e64840
ISSN:1932-6203.
Antonio, Varriale; Marabotti, Anna; Giampiero, Mei; Maria, Staiano; Sabato, D’Auria
Digital Object Identifier (DOI): 10.1371/journal.pone.0064840
Codice identificativo ISI: WOS:000319961900017
Codice identificativo SCOPUS: 2-s2.0-84878653735
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2013
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Static and dynamic interactions between GALK enzyme and known inhibitors: guidelines to design new drugs for galactosemic patients.
EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY. Vol. 63. Pag.423-434
ISSN:0223-5234.
Federica, Chiappori; Ivan, Merelli; Luciano, Milanesi; Marabotti, Anna
Digital Object Identifier (DOI): 10.1016/j.ejmech.2013.02.021
Codice identificativo ISI: WOS:000322855400040
Codice identificativo SCOPUS: 2-s2.0-84875018353
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2013
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Myosin-binding Protein C DNA variants in domestic cats (A31P, A74T, R820W) and their association with Hypertrophic cardiomyopathy
JOURNAL OF VETERINARY INTERNAL MEDICINE. Vol. 27. Pag.275-285
ISSN:1939-1676.
Longeri, M; Ferrari, P; Knafelz, P; Mezzelani, A; Marabotti, Anna; Milanesi, L; Pertica, G; Polli, M; Brambilla, Pg; Kittleson, M; Lyons, La; Porciello, F.
Digital Object Identifier (DOI): 10.1111/jvim.12031
Codice identificativo ISI: WOS:000316336000008
Codice identificativo SCOPUS: 2-s2.0-84875267721
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2012
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Finding inhibitors of protein-protein interactions (i-PPIs): a support from bioinformatics
WORLD RESEARCH JOURNAL OF PEPTIDE AND PROTEIN. Vol. 1. Pag.9-20
ISSN:2278-4608.
Marabotti, Anna; Milanesi, L.
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2012
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Site-directed mutagenesis gives insights into substrate specificity of Sulfolobus solfataricus purine-specific nucleoside hydrolase
ANNALS OF MICROBIOLOGY. Vol. 62. Pag.881-887
ISSN:1590-4261.
Marina, Porcelli; Ester, Leo; Marabotti, Anna; Giovanna, Cacciapuoti
Digital Object Identifier (DOI): 10.1007/s13213-011-0379-2
Codice identificativo ISI: WOS:000304140600050
Codice identificativo SCOPUS: 2-s2.0-84863819080
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2012
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Correlation assessment among clinical phenotypes, expression analysis and molecular modeling of 14 novel variations in the human galactose-1-phosphate uridylyltransferase gene.
HUMAN MUTATION. Vol. 33. Pag.1107-1115
ISSN:1059-7794.
Tang, M; Facchiano, A; Rachamadugu, R; Calderon, F; Mao, R; Milanesi, L; Marabotti, Anna; Lai, K.
Digital Object Identifier (DOI): 10.1002/humu.22093
Codice identificativo ISI: WOS:000304815100015
Codice identificativo SCOPUS: 2-s2.0-84861886186
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2012
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Mutation spectrum in the French cohort of galactosemic patients and structural simulation of 27 novel missense variations.
MOLECULAR GENETICS AND METABOLISM. Vol. 107. Pag.438-447
ISSN:1096-7192.
Boutron, A; Marabotti, Anna; Facchiano, A; Cheillan, D; Zater, M; Oliveira, C; Costa, C; Labrune, P; Brivet, M; Loisel, N; Morin, G; Barth, M; Altuzarra, C; Mesli, S; Rigalleau, V; Rhead, Mh; de Schrevel, G; Thauvin Robinet, C; Santos, A; Dobbelaere, D; Mention, K; Guffon, N; Cano, A; Feillet, F; Krempf, P; Pitelet, G; Bernard, O; Hermeziu, B; Gonzalez, E; Habes, D; Jacquemin, E; de Baulny, H; Roche, S; Debray, D; de Lonlay, P; Servais, A; Touati, G; Bednarek, N; Garnotel, R; Devaux, Am; Gay, C; Eyer, D; Baruteau, J; Broué, P; Labarthe, F; Maillot, F.
Digital Object Identifier (DOI): 10.1016/j.ymgme.2012.07.025
Codice identificativo ISI: WOS:000310720200028
Codice identificativo SCOPUS: 2-s2.0-84867895538
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2012
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Under pressure that splits a family in two. The case of lipocalin family.
PLOS ONE. Vol. 7. Pag.e50489-e50489
ISSN:1932-6203.
Marchal, S; Marabotti, Anna; Staiano, M; Varriale, A; Domaschke, T; Lange, R; D’Auria, S.
Digital Object Identifier (DOI): 10.1371/journal.pone.0050489
Codice identificativo ISI: WOS:000311885800077
Codice identificativo SCOPUS: 2-s2.0-84870278235
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2011
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Unraveling the structural and functional differences between purine nucleoside phosphorylase and 5’-deoxy-5’-methylthioadenosine phosphorylase from the archaeon Pyrococcus furiosus
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS. Vol. 1814. Pag.1358-1366
ISSN:1570-9639.
Cacciapuoti, G; Marabotti, Anna; Fuccio, F; Porcelli, M.
Digital Object Identifier (DOI): 10.1016/j.bbapap.2011.06.001
Codice identificativo ISI: WOS:000294513800017
Codice identificativo SCOPUS: 2-s2.0-80051667968
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2011
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Homology modeling in tandem with 3D-QSAR analyses: A computational approach to depict the agonist binding site of the human CB2 Receptor
EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY. Vol. 46. Pag.4489-4505
ISSN:0223-5234.
Cichero, E; Ligresti, A; Allarà, M; DI MARZO, V; Lazzati, Z; D'Ursi, P; Marabotti, Anna; Milanesi, L; Spallarossa, A; Ranise, A; Fossa, P.
Digital Object Identifier (DOI): 10.1016/j.ejmech.2011.07.023
Codice identificativo ISI: WOS:000295237400103
Codice identificativo SCOPUS: 2-s2.0-80052930474
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2011
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Human aryl-hydrocarbon receptor and its interaction with dioxin and physiological ligands investigated by molecular modelling and docking simulations
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS. Vol. 413. Pag.176-181
ISSN:0006-291X.
Salzano, M; Marabotti, Anna; Milanesi, L; Facchiano, A.
Digital Object Identifier (DOI): 10.1016/j.bbrc.2011.08.039
Codice identificativo ISI: WOS:000295443400005
Codice identificativo SCOPUS: 2-s2.0-80053116897
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2010
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Amino acid transport in thermophiles: characterization of an arginine-binding protein in Thermotoga maritima.2.Molecular organization and structural stability
MOLECULAR BIOSYSTEMS. Vol. 6. Pag.687-698
ISSN:1742-206X.
Sciré, A; Marabotti, Anna; Staiano, M; Iozzino, L; Luchansky, Ms; Der, Bs; Dattelbaum, Jd; Tanfani, F; D'Auria, S.
Digital Object Identifier (DOI): 10.1039/b922092e
Codice identificativo ISI: WOS:000275715000010
Codice identificativo SCOPUS: 2-s2.0-77949742907
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2010
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The misuse of terms in scientific literature
BIOINFORMATICS. Vol. 26. Pag.2498-2498
ISSN:1367-4803.
Marabotti, Anna; Facchiano, A.
Digital Object Identifier (DOI): 10.1093/bioinformatics/btq438
Codice identificativo ISI: WOS:000282170000033
Codice identificativo SCOPUS: 2-s2.0-77957245237
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2010
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Analysis of galactosemia-linked mutations of GALT enzyme using a computational biology approach
PROTEIN ENGINEERING, DESIGN & SELECTION. Vol. 23. Pag.103-113
ISSN:1741-0126.
Facchiano, A; Marabotti, Anna
Digital Object Identifier (DOI): 10.1093/protein/gzp076
Codice identificativo ISI: WOS:000274286200006
Codice identificativo SCOPUS: 2-s2.0-75649089285
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2009
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Structure and stability of a rat odorant-binding protein. Another brick in the wall
JOURNAL OF PROTEOME RESEARCH. Vol. 8. Pag.4005-4013
ISSN:1535-3893.
Sciré, A; Marabotti, Anna; Staiano, M; Briand, L; Varriale, A; Bertoli, E; Tanfani, F; D'Auria, S.
Digital Object Identifier (DOI): 10.1021/pr900346z
Codice identificativo ISI: WOS:000268661800024
Codice identificativo SCOPUS: 2-s2.0-68549108037
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2009
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Detection and molecular characterization of a novel BRAF activated domain mutation in follicular variant of papillary thyroid carcinoma
HUMAN PATHOLOGY. Vol. 40. Pag.827-833
ISSN:0046-8177.
Santarpia, L; Sherman, Si; Marabotti, Anna; Clayman, Gl; EL NAGGAR, Ak
Digital Object Identifier (DOI): 10.1016/j.humpath.2008.11.003
Codice identificativo ISI: WOS:000266419500008
Codice identificativo SCOPUS: 2-s2.0-67349272861
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2009
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GALT protein database, a bioinformatics resource for the management and analysis of structural features of a galactosemia-related protein and its mutants
GENOMICS, PROTEOMICS & BIOINFORMATICS. Vol. 7. Pag.71-76
ISSN:1672-0229.
D'Acierno, A; Facchiano, A; Marabotti, Anna
Digital Object Identifier (DOI): 10.1016/S1672-0229(08)60035-2
Codice identificativo SCOPUS: 2-s2.0-67649666838
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2009
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Structure and dynamics of cold-adapted enzymes as investigated by phosphorescence spectroscopy and molecular dynamics studies. 2. The case of an esterase from Pseudoalteromonas haloplanktis
JOURNAL OF PHYSICAL CHEMISTRY. B, CONDENSED MATTER, MATERIALS, SURFACES, INTERFACES & BIOPHYSICAL. Vol. 113. Pag.13171-13178
ISSN:1520-6106.
D'Auria, S; Aurilia, V; Marabotti, Anna; Gonnelli, M; Strambini, G.
Digital Object Identifier (DOI): 10.1021/jp9043286
Codice identificativo ISI: WOS:000270363500007
Codice identificativo SCOPUS: 2-s2.0-70349687560
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2009
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Structure and dynamics of cold-adapted enzymes as investigated by FT-IR and MD. The case of an esterase from Pseudoalteromonas haloplanktis
JOURNAL OF PHYSICAL CHEMISTRY. B, CONDENSED MATTER, MATERIALS, SURFACES, INTERFACES & BIOPHYSICAL. Vol. 113. Pag.7753-7761
ISSN:1520-6106.
Aurilia, V; RIOUX DUBÉ, Jf; Marabotti, Anna; Pézolet, M; D'Auria, S.
Digital Object Identifier (DOI): 10.1021/jp901921r
Codice identificativo ISI: WOS:000266545500005
Codice identificativo SCOPUS: 2-s2.0-66549117516
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2009
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Pressure effects on the structure and stability of the hyperthermophilic Trehalose/Maltose-binding protein from Thermococcus litoralis
JOURNAL OF PHYSICAL CHEMISTRY. B, CONDENSED MATTER, MATERIALS, SURFACES, INTERFACES & BIOPHYSICAL. Vol. 113. Pag.12804-12808
ISSN:1520-6106.
Marchal, S; Staiano, M; Marabotti, Anna; Vitale, A; Varriale, A; Lange, R; D'Auria, S.
Digital Object Identifier (DOI): 10.1021/jp904973y
Codice identificativo ISI: WOS:000269747300025
Codice identificativo SCOPUS: 2-s2.0-70349273990
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2009
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When it comes to homology, bad habits die hard
TRENDS IN BIOCHEMICAL SCIENCES. Vol. 34. Pag.98-99
ISSN:0968-0004.
Marabotti, Anna; Facchiano, A.
Digital Object Identifier (DOI): 10.1016/j.tibs.2008.12.001
Codice identificativo ISI: WOS:000265358700002
Codice identificativo SCOPUS: 2-s2.0-62949095910
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2009
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Biochemical characterization and homology modeling of a purine-specific ribonucleoside hydrolase from the archaeon Sulfolobus solfataricus: insights into mechanisms of protein stabilization
ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS. Vol. 483. Pag.55-65
ISSN:0003-9861.
Porcelli, M; Peluso, I; Marabotti, Anna; Facchiano, A; Cacciapuoti, G.
Digital Object Identifier (DOI): 10.1016/j.abb.2008.12.005
Codice identificativo ISI: WOS:000263854400008
Codice identificativo SCOPUS: 2-s2.0-59849122116
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2008
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Modeling the conformation of side chains in proteins: approaches, problems and possible developments
CURRENT CHEMICAL BIOLOGY. Vol. 2. Pag.200-214
ISSN:1872-3136.
Marabotti, Anna
Digital Object Identifier (DOI): 10.2174/187231308785739738
Codice identificativo SCOPUS: 2-s2.0-54749142884
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2008
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Molecular strategies for protein stabilization. The case of a Trehalose/Maltose-Binding Protein from Thermus thermophilus
PROTEINS. Vol. 73. Pag.839-850
ISSN:0887-3585.
Sciré, A; Marabotti, Anna; Aurilia, V; Staiano, M; Ringhieri, P; Iozzino, L; Crescenzo, R; Tanfani, F; Dauria, S.
Digital Object Identifier (DOI): 10.1002/prot.22114
Codice identificativo ISI: WOS:000261129300005
Codice identificativo SCOPUS: 2-s2.0-58149293961
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2008
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Mutant Bovine Odorant-Binding Protein: Temperature affects the protein stability and dynamics as revealed by infrared spectroscopy and molecular dynamics simulations
PROTEINS. Vol. 72. Pag.769-778
ISSN:0887-3585.
Marabotti, Anna; Lefèvre, T; Staiano, M; Crescenzo, R; Varriale, A; Rossi, M; Pézolet, M; Dauria, S.
Digital Object Identifier (DOI): 10.1002/prot.21966
Codice identificativo ISI: WOS:000257156500021
Codice identificativo SCOPUS: 2-s2.0-46449107710
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2008
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Energy-based prediction of amino acid-nucleotide base recognition
JOURNAL OF COMPUTATIONAL CHEMISTRY. Vol. 29. Pag.1955-1969
ISSN:0192-8651.
Marabotti, Anna; Spyrakis, F; Facchiano, A; Cozzini, P; Alberti, S; Kellogg, Ge; Mozzarelli, A.
Digital Object Identifier (DOI): 10.1002/jcc.20954
Codice identificativo ISI: WOS:000258015500010
Codice identificativo SCOPUS: 2-s2.0-47549102750
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2008
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Hydrophobic interactions and ionic networks play an important role in thermal stability and denaturation mechanism of the porcine Odorant-Binding Protein
PROTEINS. Vol. 71. Pag.35-44
ISSN:0887-3585.
Stepanenko, Ov; Marabotti, Anna; Kuznetsova, Im; Turoverov, Kk; Fini, C; Varriale, A; Staiano, M; Rossi, M; D'Auria, S.
Digital Object Identifier (DOI): 10.1002/prot.21658
Codice identificativo ISI: WOS:000254035500005
Codice identificativo SCOPUS: 2-s2.0-40549111967
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2008
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Wild-type and mutant bovine odorant-binding proteins to probe the role of the quaternary structure organization in the protein thermal stability
JOURNAL OF PROTEOME RESEARCH. Vol. 7. Pag.5221-5229
ISSN:1535-3893.
Marabotti, Anna; Sciré, A; Staiano, M; Crescenzo, R; Aurilia, V; Tanfani, F; D'Auria, S.
Digital Object Identifier (DOI): 10.1021/pr800528b
Codice identificativo ISI: WOS:000261478700017
Codice identificativo SCOPUS: 2-s2.0-61349111425
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2008
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The Tryptophan phosphorescence of porcine and mutant bovine odorant-binding proteins: a probe for the local protein structure and dynamics
JOURNAL OF PROTEOME RESEARCH. Vol. 7. Pag.1151-1158
ISSN:1535-3893.
D'Auria, S; Staiano, M; Varriale, A; Gonnelli, M; Marabotti, Anna; Rossi, M; Strambini, Gb
Digital Object Identifier (DOI): 10.1021/pr700755z
Codice identificativo ISI: WOS:000253825100030
Codice identificativo SCOPUS: 2-s2.0-44449086041
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2008
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The differences in the microenvironment of the two tryptophan residues of the glutamine-binding protein from Escherichia coli shed light on the binding properties and the structural dynamics of the protein
PROTEINS. Vol. 71. Pag.743-750
ISSN:0887-3585.
D'Auria, S; Staiano, M; Varriale, A; Gonnelli, M; Marabotti, Anna; Rossi, M; Strambini, Gb
Digital Object Identifier (DOI): 10.1002/prot.21748
Codice identificativo ISI: WOS:000254263400021
Codice identificativo SCOPUS: 2-s2.0-41149173805
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2008
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Pyrimidine-specific ribonucleoside hydrolase from the archaeon Sulfolobus solfataricus: biochemical characterization and homology modeling
THE FEBS JOURNAL. Vol. 275. Pag.1900-1914
ISSN:1742-464X.
Porcelli, M; Concilio, L; Peluso, I; Marabotti, Anna; Facchiano, A; Cacciapuoti, G.
Digital Object Identifier (DOI): 10.1111/j.1742-4658.2008.06348.x
Codice identificativo ISI: WOS:000254499500027
Codice identificativo SCOPUS: 2-s2.0-41549084688
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2007
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Energetics of the protein-DNA-water interaction
BMC STRUCTURAL BIOLOGY. Vol. 7. Pag.1-18
ISSN:1472-6807.
Spyrakis, F; Cozzini, P; Bertoli, C; Marabotti, Anna; Kellogg, Ge; Mozzarelli, A.
Digital Object Identifier (DOI): 10.1186/1472-6807-7-4
Codice identificativo ISI: WOS:000243718000001
Codice identificativo SCOPUS: 2-s2.0-33846894984
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2007
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A novel point mutation in the ligand-binding domain of the human glucocorticoid receptor (hGR) in a patient with glucocorticoid resistance
INTERNATIONAL JOURNAL ON DISABILITY AND HUMAN DEVELOPMENT. Vol. 6. Pag.105-112
ISSN:2191-1231.
Cannavo', S; Karl, M; Santarpia, L; Facchiano, A; Marabotti, Anna; Trimarchi, F; Benvenga, S.
Digital Object Identifier (DOI): 10.1515/IJDHD.2007.6.1.105
Codice identificativo ISI: WOS:000254007800015
Codice identificativo SCOPUS: 2-s2.0-56149123386
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2007
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New computational strategy to analyze the interactions of ERalpha and ERbeta with different ERE sequences
JOURNAL OF COMPUTATIONAL CHEMISTRY. Vol. 28. Pag.1031-1041
ISSN:0192-8651.
Marabotti, Anna; Colonna, G; Facchiano, A.
Digital Object Identifier (DOI): 10.1002/jcc.20582
Codice identificativo ISI: WOS:000245029500004
Codice identificativo SCOPUS: 2-s2.0-33947728291
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2007
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Molecular adaptation strategies to high temperature and thermal denaturation mechanism of the D-Trehalose/D-Maltose-binding protein from the hyperthermophilic archaeon Thermococcus litoralis
PROTEINS. Vol. 67. Pag.1002-1009
ISSN:0887-3585.
Fessas, D; Staiano, M; Barbiroli, A; Marabotti, Anna; Schiraldi, A; Varriale, A; Rossi, M; D'Auria, S.
Digital Object Identifier (DOI): 10.1002/prot.21383
Codice identificativo ISI: WOS:000246415700020
Codice identificativo SCOPUS: 2-s2.0-34248551438
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2007
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Stability and Dynamics of the Porcine Odorant-Binding Protein
BIOCHEMISTRY. Vol. 46. Pag.11120-11127
ISSN:0006-2960.
Staiano, M; D'Auria, S; Varriale, A; Rossi, M; Marabotti, Anna; Fini, C; Stepanenko, O; Kuznetsova, I; Turoverov, Kk
Digital Object Identifier (DOI): 10.1021/bi7008129
Codice identificativo ISI: WOS:000249726500011
Codice identificativo SCOPUS: 2-s2.0-34848923766
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2006
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D-Trehalose/D-Maltose-binding protein from the hyperthermophilic archaeon Thermococcus litoralis. The binding of trehalose and maltose results in different protein conformational states
PROTEINS. Vol. 63. Pag.754-767
ISSN:0887-3585.
Herman, P; Staiano, M; Marabotti, Anna; Varriale, A; Scire', A; Tanfani, F; Vecer, J; Rossi, M; D'Auria, S.
Digital Object Identifier (DOI): 10.1002/prot.20952
Codice identificativo ISI: WOS:000237863100005
Codice identificativo SCOPUS: 2-s2.0-33646772104
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2006
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Pressure effect on the stability and the conformational dynamics of the D-Galactose/D-Glucose-binding protein from Escherichia coli
PROTEINS. Vol. 62. Pag.193-201
ISSN:0887-3585.
Marabotti, Anna; Herman, P; Staiano, M; Varriale, A; DE CHAMPDORE', M; Rossi, M; Gryczynski, Z; D'Auria, S.
Digital Object Identifier (DOI): 10.1002/prot.20753
Codice identificativo ISI: WOS:000234438600019
Codice identificativo SCOPUS: 2-s2.0-30344443095
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2006
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Pressure affects the structure and the dynamics of the D-Galactose/D-Glucose-Binding Protein from Escherichia coli by perturbing the C-terminal domain of the protein
BIOCHEMISTRY. Vol. 45. Pag.11885-11894
ISSN:0006-2960.
Marabotti, Anna; Ausili, A; Staiano, M; Scire', A; Tanfani, F; Parracino, A; Varriale, A; Rossi, M; D'Auria, S.
Digital Object Identifier (DOI): 10.1021/bi061158k
Codice identificativo ISI: WOS:000240752400018
Codice identificativo SCOPUS: 2-s2.0-33749334109
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2006
Articolo in rivista
Binding of glucose to the D-Galactose/D-Glucose-binding protein from Escherichia coli restores the native protein secondary structure and the thermostability that are lost upon calcium depletion
JOURNAL OF BIOCHEMISTRY. Vol. 139. Pag.213-221
ISSN:0021-924X.
D'Auria, S; Ausili, A; Marabotti, Anna; Varriale, A; Scognamiglio, V; Staiano, M; Bertoli, E; Rossi, M; Tanfani, F.
Digital Object Identifier (DOI): 10.1093/jb/mvj027
Codice identificativo ISI: WOS:000235452100008
Codice identificativo SCOPUS: 2-s2.0-33645297396
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2006
Articolo in rivista
Assessment of the conformational features of Vasoactive Intestinal Peptide in solution by limited proteolysis experiments
BIOPOLYMERS. Vol. 81. Pag.110-119
ISSN:0006-3525.
Stiuso, P; Marabotti, Anna; Facchiano, A; Lepretti, M; Dicitore, A; Ferranti, P; Carteni', M.
Digital Object Identifier (DOI): 10.1002/bip.20385
Codice identificativo ISI: WOS:000234761600006
Codice identificativo SCOPUS: 2-s2.0-33645560909
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2006
Articolo in rivista
La predizione della struttura delle proteine
RIVISTA ITALIANA DI COMPOSITI E NANOTECNOLOGIE. Vol. 2. Pag.43-47
ISSN:1826-4697.
Costantini, S; Facchiano, A; Marabotti, Anna
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2005
Articolo in rivista
Homology modeling studies on human Galactose-1-phosphate uridylyltransferase and on its galactosemia-related mutant Q188R provide an explanation of molecular effects of the mutation on homo- and heterodimers
JOURNAL OF MEDICINAL CHEMISTRY. Vol. 48. Pag.773-779
ISSN:0022-2623.
Marabotti, Anna; Facchiano, Am
Digital Object Identifier (DOI): 10.1021/jm049731q
Codice identificativo ISI: WOS:000226881300014
Codice identificativo SCOPUS: 2-s2.0-13444291908
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2005
Articolo in rivista
Binding of glutamine to Glutamine-binding protein from Escherichia coli induces changes in protein structure and increases protein stability
PROTEINS. Vol. 58. Pag.80-87
ISSN:0887-3585.
D'Auria, S; Scire', A; Varriale, A; Scognamiglio, V; Staiano, M; Ausili, A; Marabotti, Anna; Rossi, M; Tanfani, F.
Digital Object Identifier (DOI): 10.1002/prot.20289
Codice identificativo ISI: WOS:000225905000009
Codice identificativo SCOPUS: 2-s2.0-10844275618
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2004
Articolo in rivista
Theoretical model of the three-dimensional structure of a sugar-binding protein from Pyrococcus horikoshii: structural analysis and sugar-binding simulations
BIOCHEMICAL JOURNAL. Vol. 380. Pag.677-684
ISSN:0264-6021.
Marabotti, Anna; D'Auria, S; Rossi, M; Facchiano, Am
Digital Object Identifier (DOI): 10.1042/BJ20031876
Codice identificativo ISI: WOS:000222338100011
Codice identificativo SCOPUS: 2-s2.0-3042739157
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2004
Articolo in rivista
A thermostable Sugar-Binding Protein from the archaeon Pyrococcus horikoshii as a probe for the development of a stable fluorescence biosensor for diabetic patients
BIOTECHNOLOGY PROGRESS. Vol. 20. Pag.1572-1577
ISSN:8756-7938.
Staiano, M; Sapio, Mr; Scognamiglio, V; Marabotti, Anna; Facchiano, Am; Bazzicalupo, P; Rossi, M; D'Auria, S.
Digital Object Identifier (DOI): 10.1021/bp049857g
Codice identificativo ISI: WOS:000224377700036
Codice identificativo SCOPUS: 2-s2.0-5444238423
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2004
Articolo in rivista
Free energy of ligand binding to protein: evaluation of the contribution of water molecules by computational methods
CURRENT MEDICINAL CHEMISTRY. Vol. 11. Pag.3093-3118
ISSN:0929-8673.
Cozzini, P; Fornabaio, M; Marabotti, Anna; Abraham, Dj; Kellogg, Ge; Mozzarelli, A.
Digital Object Identifier (DOI): 10.2174/0929867043363929
Codice identificativo ISI: WOS:000224899200008
Codice identificativo SCOPUS: 2-s2.0-4143121554
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2004
Articolo in rivista
Modulation of the structural integrity of helix F in apomyoglobin by single amino acid replacements.
PROTEIN SCIENCE. Vol. 13. Pag.1572-1585
ISSN:0961-8368.
Picotti, P; Marabotti, Anna; Negro, A; Musi, V; Spolaore, B; Zambonin, M; Fontana, A.
Digital Object Identifier (DOI): 10.1110/ps.04635304
Codice identificativo ISI: WOS:000221630900014
Codice identificativo SCOPUS: 2-s2.0-2442672732
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2002
Articolo in rivista
Simple, intuitive calculations of free energy of binding for protein-ligand complexes. 1. Models without explicit constrained water.
JOURNAL OF MEDICINAL CHEMISTRY. Vol. 45. Pag.2469-2483
ISSN:0022-2623.
Cozzini, P; Fornabaio, M; Marabotti, Anna; Abraham, Dj; Kellogg, Ge; Mozzarelli, A.
Digital Object Identifier (DOI): 10.1021/jm0200299
Codice identificativo ISI: WOS:000175957700014
Codice identificativo SCOPUS: 2-s2.0-0037030649
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2002
Articolo in rivista
Crystal structures of a new class of allosteric effectors complexed to tryptophan synthase
THE JOURNAL OF BIOLOGICAL CHEMISTRY. Vol. 277. Pag.10647-10652
ISSN:0021-9258.
Weyand, M; Schlichting, I; Marabotti, Anna; Mozzarelli, A.
Digital Object Identifier (DOI): 10.1074/jbc.M111285200
Codice identificativo ISI: WOS:000174549200137
Codice identificativo SCOPUS: 2-s2.0-0037155812
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2002
Articolo in rivista
Crystal structure of the betaSer178→Pro mutant of tryptophan synthase. A "knock-out" allosteric enzyme
THE JOURNAL OF BIOLOGICAL CHEMISTRY. Vol. 277. Pag.10653-10660
ISSN:0021-9258.
Weyand, M; Schlichting, I; Herde, P; Marabotti, Anna; Mozzarelli, A.
Digital Object Identifier (DOI): 10.1074/jbc.M111031200
Codice identificativo ISI: WOS:000174549200138
Codice identificativo SCOPUS: 2-s2.0-0037155842
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2001
Articolo in rivista
Allosteric communication of tryptophan synthase. Functional and regulatory properties of the betaS178P mutant
THE JOURNAL OF BIOLOGICAL CHEMISTRY. Vol. 276. Pag.17747-17753
ISSN:0021-9258.
Marabotti, Anna; DE BIASE, D; Tramonti, A; Bettati, S; Mozzarelli, A.
Digital Object Identifier (DOI): 10.1074/jbc.M011781200
Codice identificativo ISI: WOS:000168866500019
Codice identificativo SCOPUS: 2-s2.0-0035947566
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2000
Articolo in rivista
Novel allosteric effectors of the tryptophan synthase alpha2beta2 complex identified by computer-assisted molecular modeling
BIOCHIMICA ET BIOPHYSICA ACTA. Vol. 1476. Pag.287-299
ISSN:0006-3002.
Marabotti, Anna; Cozzini, P; Mozzarelli, A.
Digital Object Identifier (DOI): 10.1016/S0167-4838(99)00242-3
Codice identificativo ISI: WOS:000085469600013
Codice identificativo SCOPUS: 2-s2.0-0035947566
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2000
Articolo in rivista
HINT predictive analysis of binding between retinol binding protein and hydrophobic ligands.
BIOORGANIC & MEDICINAL CHEMISTRY LETTERS. Vol. 10. Pag.2129-2132
ISSN:0960-894X.
Marabotti, Anna; Balestreri, L; Cozzini, P; Mozzarelli, A; Kellogg, Ge; Abraham, Dj
Digital Object Identifier (DOI): 10.1016/S0960-894X(00)00414-5
Codice identificativo ISI: WOS:000089679900020
Codice identificativo SCOPUS: 2-s2.0-0033812977
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